Ok, I'm back at home and retesting this. I've enabled logging, renamed my old FSUIPC4.ini, and restarted Prepar3d. Controls were turned off in Prepar3d, and nothing assigned by FSUIPC yet. I assigned axes for aileron, elevator, rudder, left and right brakes, and throttles 1 and 2. I then calibrated them all. This was done using the default flight, and the default F22. All controls moved and logged as you said they should. I then switched into the Maule. I assigned the tiller axis with the profile specific box checked, and named the profile "maule". I calibrated the tiller axis, and all functions worked and logged as you described that they should. I switched back to the F22. The tiller had no effect on the controls, and did not log rudder movement. The rudder itself, however, didn't either with 0 speed. I sped up, and the rudder slowly regained effectiveness (and logged that way accordingly) as it would if the tiller were assigned to it's profile. I should note here that the F22 has not been assigned a profile (perhaps this is where I run into trouble?) I then reset the axis for the tiller so that it was no longer calibrated by FSUIPC. The F22 then began to behave correctly (meaning the rudders move and log at 0 speed with the rudder pedals). This of course broke the functioning of the tiller for the Maule after switching back to it.
Here is a paste of my INI file after recalibrating the tiller axis (which made the F22 behave incorrectly again). Thanks for your time.
[General] UpdatedByVersion=4942 History=JKOJ9MH48P2AIB1JWC5QF InitDelayDevicesToo=No NewInterceptTextMenu=No UseSystemTime=No UseMidMouseBtn=Yes MouseWheelMove=No MouseWheelTrim=No MouseWheelTrimSpeed=1 JoystickTimeout=20 PollGFTQ6=Yes BlankDisplays=No FixControlAccel=No FixMachSpeedBug=No DeleteVehiclesForAES=Yes AutoScanDevices=Yes VisibilityOptions=No OneCloudLayer=No CloudTurbulence=No CloudIcing=No GenerateCirrus=No SuppressCloudTurbulence=No MaxIce=-4 MinIce=-1 UpperWindGusts=No SuppressWindTurbulence=No SuppressWindVariance=No WindTurbulence=No TurbulenceRate=1.0,5.0 TurbulenceDivisor=20,20,40,40 SuppressAllGusts=No MaxSurfaceWind=0 WindLimitLevel=200 WindDiscardLevel=400 WindAjustAltitude=No WindAjustAltitudeBy=2000 SmoothBySimTime=No WindSmoothing=No WindSmoothness=2 WindSmoothAirborneOnly=Yes PressureSmoothness=0 TemperatureSmoothness=0 DisconnTrimForAP=No ZeroElevForAPAlt=No ThrottleSyncAll=No WhiteMessages=No ShowPMcontrols=No SpoilerIncrement=512 MagicBattery=No RudderSpikeRemoval=No ElevatorSpikeRemoval=No AileronSpikeRemoval=No ReversedElevatorTrim=No ClockSync=No ClockSyncMins=5 ClearWeatherDynamics=No OwnWeatherChanges=No TimeForSelect=4 LoadFlightMenu=No LoadPlanMenu=No PauseAfterCrash=No BrakeReleaseThreshold=75 SaveDataWithFlights=No ZapSound=firework ShortAircraftNameOk=Substring UseProfiles=Yes EnableMouseLook=No DelayedMouseLookZoom=No AxesWrongRange=No TCASid=Flight TCASrange=40 AxisCalibration=No DirectAxesToCalibs=No ShowMultilineWindow=Yes SuppressSingleline=No SuppressMultilineFS=No AxisIntercepts=No DontResetAxes=No InitDelay=0 GetNearestAirports=No OOMcheck=Yes OOMcheckInterval=10 WeatherReadFactor=2 WeatherRewriteSeconds=1 CustomWeatherModify=No SimConnectStallTime=1 InitialStallTime=10 NormalStallTime=1 LuaRerunDelay=66 FSVersionUsed="Lockheed Martin® Prepar3D® v2",2.5.12946.0 SimConnectUsed=2.5.0.0 LogAxes=Yes [JoyNames] AutoAssignLetters=No 0=Logitech Driving Force Pro USB 0.GUID={3FBAEFC0-F9C7-11E2-8004-444553540000} 1=CH THROTTLE QUADRANT 1.GUID={65228670-2EA1-11E2-8004-444553540000} 2=CH FLIGHT SIM YOKE USB 2.GUID={65228670-2EA1-11E2-8005-444553540000} 3=Saitek Pro Flight Combat Rudder Pedals 3.GUID={67972F60-1B5C-11E4-8001-444553540000} 4=SideWinder Force Feedback 2 Joystick 4.GUID={19D6ABC0-2273-11E4-8001-444553540000} 5=Cyborg F.L.Y.5 Flight Stick 5.GUID={4443EBA0-F909-11E2-8001-444553540000} 6=DTA Rotary Encoder 6.GUID={197D74C0-AFF8-11E4-8001-444553540000} [Axes] PollInterval=10 RangeRepeatRate=10 0=1X,256,D,9,0,0,0 1=1Y,256,D,10,0,0,0 2=2X,256,D,1,0,0,0 3=2Y,256,D,2,0,0,0 4=3X,256,D,7,0,0,0 5=3Y,256,D,8,0,0,0 6=3R,256,D,3,0,0,0 [buttons] PollInterval=25 ButtonRepeat=20,10 [LuaFiles] 1=ipcReady 2=linda [AutoSave] Next=1 Interval=60 Files=10 SaveOnGround=No AutoSaveEnabled=No [GPSout] GPSoutEnabled=No [GPSout2] GPSoutEnabled=No [WideServer] WideFSenabled=Yes [sounds] Path=C:\Program Files (x86)\Lockheed Martin\Prepar3D v2\Sound\ Device1=Primary Sound Driver Device2=Speakers (SoundMAX Integrated Digital HD Audio) Device3=SPDIF Interface (SoundMAX Integrated Digital HD Audio) Device4=Digital Output (SoundMAX Integrated Digital HD Audio) [Window.LUA display] Docked=7347, 2836, 3541, 728 [JoystickCalibration] AllowSuppressForPFCquad=Yes ExcludeThrottleSet=Yes ExcludeMixtureSet=Yes ExcludePropPitchSet=Yes SepRevsJetsOnly=No ApplyHeloTrim=No UseAxisControlsForNRZ=No FlapsSetControl=0 FlapDetents=No ReverserControl=66292 Reverser1Control=66422 Reverser2Control=66425 Reverser3Control=66428 Reverser4Control=66431 MaxThrottleForReverser=256 AileronTrimControl=66731 RudderTrimControl=66732 CowlFlaps1Control=66162 CowlFlaps2Control=66163 CowlFlaps3Control=66164 CowlFlaps4Control=66165 SteeringTillerControl=0 MaxSteerSpeed=60 Aileron=-16248,-512,512,16252 Elevator=-16245,-512,512,16256 Rudder=-16351,-512,512,16351 LeftBrake=520,16380/16 RightBrake=664,16380/16 Throttle1=-16380,-512,512,16380/32 Throttle2=-16380,-512,512,16380/32 SteeringTiller=-16380,-512,512,16380 [Profile.maule] 1=Maule M7 260C [Axes.maule] RangeRepeatRate=10 0=1X,256,D,9,0,0,0 1=1Y,256,D,10,0,0,0 2=2X,256,D,1,0,0,0 3=2Y,256,D,2,0,0,0 4=3X,256,D,7,0,0,0 5=3Y,256,D,8,0,0,0 6=3R,256,D,3,0,0,0 7=4S,256,D,36,0,0,0