First, sorry for the delate in my answer.
I checked runways.txt and I saw many runways and frecuencies were deleted in several airports.
For example in LEMD, the file says:
Area.171 "Sim-wings Madrid Barajas Professional" (Layer=171)
Path(Local/Remote)=F:\Addons\Sim-wings Madrid Barajas Professional\.
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F:\Addons\Sim-wings Madrid Barajas Professional\.\scenery\LEMD_AFX-OP02-N.bgl
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Deletions check for Airport LEMD:
Delete all taxiways!
Delete all runways and starts!
*** DelBth *** LEMD0151 Lat 40.493832 Long -3.556907 Alt 1936.99 Hdg 145 Len 11483 Wid 197
*** DelBth *** LEMD0152 Lat 40.484657 Long -3.575892 Alt 1936.99 Hdg 145 Len 13485 Wid 197
*** DelBth *** LEMD0181 Lat 40.533371 Long -3.559263 Alt 1936.99 Hdg 183 Len 11483 Wid 197
*** DelBth *** LEMD0182 Lat 40.531639 Long -3.574802 Alt 1936.99 Hdg 183 Len 14279 Wid 197 ILS 110.70, Flags: GS DME BC
*** DelBth *** LEMD0331 Lat 40.455406 Long -3.546138 Alt 1936.99 Hdg 325 Len 13485 Wid 197 ILS 109.90, Flags: GS DME BC
*** DelBth *** LEMD0332 Lat 40.468922 Long -3.531566 Alt 1936.99 Hdg 325 Len 11483 Wid 197 ILS 109.10, Flags: GS DME BC
*** DelBth *** LEMD0361 Lat 40.492470 Long -3.574586 Alt 1936.99 Hdg 3 Len 14279 Wid 197
*** DelBth *** LEMD0362 Lat 40.501877 Long -3.559090 Alt 1936.99 Hdg 3 Len 11483 Wid 197
Delete all helipads!
Delete all taxiways!
COM: Delete all frequencies!
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F:\Addons\Sim-wings Madrid Barajas Professional\.\scenery\LEMD_AFX-OP02-N.bgl
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Airport LEMD :N40:28:14.2163 W003:33:42.5330 1999.99ft
Country Name="Spain"
State Name="Madrid"
City Name="Madrid"
Airport Name="Madrid-Barajas"
in file: F:\Addons\Sim-wings Madrid Barajas Professional\.\scenery\LEMD_AFX-OP02-N.bgl
I don´t understand which is the reason becouse all raunways are deleted when run makerunways as administrator rights. What´s wrong??
Last weekend i reinstalled P3D and r4.csv file had all LEMD´s runways but when ran makerunways, LEMD only had 4 runways.
Thanks for your help.